Browse of TCMCG006C25385 protein

CDS

Accession Number	TCMCG006C25385
gbkey	CDS
Protein Id	XP_022551255.1
Location	join(15544073..15544217,15544439..15544605,15544696..15544785,15544945..15545025,15545180..15545344,15545423..15547495,15547581..15547727,15547794..15548086,15548215..15548305)
Gene	LOC106421075
GeneID	106421075
Organism	Brassica napus

Protein

Length	1083aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022695534.1
Definition	PH, RCC1 and FYVE domains-containing protein 1-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	U
Description	endoplasmic reticulum tubular network membrane organization
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	R05196        [VIEW IN KEGG]
KEGG_rclass	RC00049        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko04147        [VIEW IN KEGG]
KEGG_ko	ko:K00705        [VIEW IN KEGG] ko:K17279        [VIEW IN KEGG]
EC	2.4.1.25        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00500        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] map00500        [VIEW IN KEGG] map01100        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006970        [VIEW IN EMBL-EBI] GO:0006972        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009414        [VIEW IN EMBL-EBI] GO:0009415        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009651        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009737        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0010035        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0033993        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0042538        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0097305        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATGGCCACTTCCATTTAACGTTTGGAAAGAAAACACTCCTTAACAAGGAGGTAGTGGATAAAGCGGTTCGCTTCTCTAACAAGAAGGATGCTAGTGGTGATGAAGACGATCCCGGTAGACCAACTAGTAATGGAATAGAACGATGTGCTCTCTCTTTTCATCAACCTGTGTTCCTCTGTATAAGTCATTGGAAATTGATCCTTTTTGACCAAATCCAACAGGCCATTACGTCACTTAAGAAAGGTTCCTACTTGCTGAAATACGGTCGCAGGGGGAAGCCTAAGTTCTGTCCATTCCAGCTTACAAGTGACGAGTCAACATTAGTATGGTACTCTGGCAAAGAAGAGAAGCAGATTAAGCTTAGTCAAGTCCTCAGAATTGTTCCTGGACAACGCACGGCTACATTTAAGAGATATCCACGACCGGAGAAAGAGTATCAGTCCTTTTCCCTCATATGTCCTGATAGGTCCTTGGATTTGATATGTAAAGACAAGGACGAAGCAGAAGTGTGGGTTGTTGGTTTGAAGGCACTGATCACTCGTGTAAAAATCTCCAAATGGAAAAACACTATTAAACCTGAGATCACTTCACCTGAATGTCCAACCCCTCATGCACGGAGAGTGTCTCCCTTCGTATCAATCCTTGATCAAGTTACTCAGCCCTCTACCGAGACTTCTACACCAAACCGGTTAGGAAAAGTCTTTTCTGACATTGTCTCAATAACTGCACCAGACAATAACAATCAGACAGAAGCCAATACTCTCAATCCTAACCTATACTGTCCTATTTCTCCTGGGAATGTCGAAAACCCGAATTCACGGTTCTCCATGGGGGGTGACCTGGCTAGACTCAGCCTATCTAGCGCTGTGAGTACATCTAGCCACGGTTCGTATCACGAAGAGTTTGATGCTTTAGGTGATGTTTTCCTCTGGGGTGAAGCTATAAGTGATGGTGTACTAAGTGGTACTGGAAAGACATTACATTCCACTACAGAGGATGCACTTTTACCAAAAGCATTAGAGTCAACAATAGTTCTCGATGCTCAAAACATAGCATGTGGTAGGTGTCATGCCGTTTTAGTTACAAAACAAGGAGAGATCTTCAGCTGGGGAGAGGGAACAGGTGGGAAACTAGGACATGGCTTAGAAAAAGATACCCACCAACCAAAGTTCATTAGTAGTGTCAGAGGGATGAATTTCAAATCTTTAGCCTGTGGTGAATTTCATACATGTTCTGTTACTCAATCTGGTGATCTTTATACTTGGGGTGACGGCACTCGAAATGTCGATTTGCTTGGTCATGGGAGTGAATCCAGCTGCTGGATTCCCAAGAGGGTGACTGGTGTCTTACAAGGAATGCATGTGTCTTATGTGGCTTGTGGTCCTTGGCATACAGCAGTGGTTGCATCATCAGGACAGTTGTTTACATTTGGAGACGGATGTTTTGGTGCACTAGGTCATGGAGACAGAACAAGCTCTAGTGTTCCGCGCGTAGTTGAAAGCCTAAGTGAAGTAAGAGTAATGAAGGTTGCTTGTGGATTTTGGCATACAGCTGCAGTGGTGGAGGTTACAAATGAAGCATCTGATGCAGAGCTCTACTCTTCGTGTGGACAACTGTTCACATGGGGAGATGGTGAGAAAGGCCAGCTTGGTCATGGTGACAATGCGGAAAAGCTACTCCCCGAGTGCGTAACCTCATTGGCAGATGAAAAAATCTGCCAAGTTGCTTGTGGCCATAGTCTCACCGTTTCTCTTACATCCAATGGACATGTGTTTACAATGGGTAGCCCGGCTTACGGCCAGCTGGGCAACCCTACGGCCAAGGAGAAGGTCCCTTCACGCGTCGAAGGAGACATAACAGAGACTTGTGTAGAGGAGATTGCGTGTGGTTCTCATCATGTGGCTGTGTTGACATCTAAATCAGAGGTTTACACTTGGGGAAAAGGATTAAATGGTCAGTTAGGACACGGAACCGTTGAGAACAAAAGAGAACCTGCTGTTGTTGGGTTTTTGAAAGAAAAACAAGTCAAGGCTATAACATGTGGTTCCAACTTCACTGCTGTGATTTGTCTTAACAAATGGGTACCTGGCTCTGAACATTCTCTCTGTGCTGGTTGCCGTAACCCTTTCAATTTTAGAAGAAAACGTCACAATTGTTACAACTGTGGTCTCATCTTTTGTAAAGTATGCAGCAGTAGAAAGTCTTTGAGAGCTGCTCTTGCGCCTGATATGAACAAACCATATAGAGTGTGTTATGGATGTTTCACCAAGCTGAAAAGGTCTAGAGAACTGTCTCCTCCTCCTCCTACTCCACGTACAAGAAACCTTTTGAATATGCGAAAATCGACCGATGTTTCAGAAAAAACTCCAAAACTCCTCTCACCACACTCCAGAATAGCCTCGGCTGACTCTTTAGTGCAATATGGCGAAGGAAGACACAGCAAAAGAGACGTGAAACCGGAAGCAAGTAACAGTAATGTCTTCGCCTTAGGCAGTGTACAGCCAGCTATGTCGCCGTTATTAAGAGGATCAATAGCTTGGCCTAGAATCTCCAAAAATATGATAGTTAAAGTTCCTGGTTCAAGAGTTAGCTCTCGCACAGCGTCTCCTGTTTCAGTGAAGTCAACTAGTCCACGCCCATCTCATGAAGTAACAACTGATGAATCTAAACACATAAAAGACAGTTTTGGTCAAGAAATTGTGGGTCTAAAGGAACATGTAGAACAACTGACTTCCAAAACACAACAACTTGAAGAAGAACTTGAAAAAACTAAAAGGCAGTTGAAAGTGGTCACTGCAATGGCAGCAGATGAAGCAGAGGAAAACAGATCCGCAAAAGAGGTTATTAGATCTCTAACCACTCAGTTGAAGGAAATGTCTGGAAGATTACCTCAAAAGGATGATACTAGCACTAACTTAAGACACACAGAAAAAGAGACAACATTAGAGAGTCAAACTCAGACTAGTTCCCAGACACATATAAGAAGTATGGTCCCTCATGATAGTCAATCAGAAAACAACTTAAGTAAGAGTTTTGTTAATGGACATAGAAGACATAATGAGAAGGCAGAGAGAGTTGTGCAAGACGAACCTGGAGTTTATTTGACACTGTTGTCTTTACCTGGTGGTGGTAATGAACTCAAGCGTGTCCGGTTCAGCCGGAAACAGTTTACTGAAGAACAAGCAGAGAAGTGGTGGGGTGAAAATGGAGGTAAAGCTTGTGAGCGACACAACATTCTAGTTTCCTAG

Protein:   MDGHFHLTFGKKTLLNKEVVDKAVRFSNKKDASGDEDDPGRPTSNGIERCALSFHQPVFLCISHWKLILFDQIQQAITSLKKGSYLLKYGRRGKPKFCPFQLTSDESTLVWYSGKEEKQIKLSQVLRIVPGQRTATFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKALITRVKISKWKNTIKPEITSPECPTPHARRVSPFVSILDQVTQPSTETSTPNRLGKVFSDIVSITAPDNNNQTEANTLNPNLYCPISPGNVENPNSRFSMGGDLARLSLSSAVSTSSHGSYHEEFDALGDVFLWGEAISDGVLSGTGKTLHSTTEDALLPKALESTIVLDAQNIACGRCHAVLVTKQGEIFSWGEGTGGKLGHGLEKDTHQPKFISSVRGMNFKSLACGEFHTCSVTQSGDLYTWGDGTRNVDLLGHGSESSCWIPKRVTGVLQGMHVSYVACGPWHTAVVASSGQLFTFGDGCFGALGHGDRTSSSVPRVVESLSEVRVMKVACGFWHTAAVVEVTNEASDAELYSSCGQLFTWGDGEKGQLGHGDNAEKLLPECVTSLADEKICQVACGHSLTVSLTSNGHVFTMGSPAYGQLGNPTAKEKVPSRVEGDITETCVEEIACGSHHVAVLTSKSEVYTWGKGLNGQLGHGTVENKREPAVVGFLKEKQVKAITCGSNFTAVICLNKWVPGSEHSLCAGCRNPFNFRRKRHNCYNCGLIFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKRSRELSPPPPTPRTRNLLNMRKSTDVSEKTPKLLSPHSRIASADSLVQYGEGRHSKRDVKPEASNSNVFALGSVQPAMSPLLRGSIAWPRISKNMIVKVPGSRVSSRTASPVSVKSTSPRPSHEVTTDESKHIKDSFGQEIVGLKEHVEQLTSKTQQLEEELEKTKRQLKVVTAMAADEAEENRSAKEVIRSLTTQLKEMSGRLPQKDDTSTNLRHTEKETTLESQTQTSSQTHIRSMVPHDSQSENNLSKSFVNGHRRHNEKAERVVQDEPGVYLTLLSLPGGGNELKRVRFSRKQFTEEQAEKWWGENGGKACERHNILVS